Data for: "A synbiotic intervention modulates meta-omics signatures of gut redox potential and acidity in elective caesarean born infants"
Supplementary datasets published to support the paper, "A synbiotic intervention modulates meta-omics signatures of gut redox potential and acidity in elective caesarean born infants". Table 1 contains information on the number of subjects per group and number of 16S rRNA samples per group and time point, Table 2 contains 16S rRNA sequencing outputs, Table 3 contains Permutational Multivariate Analysis of Variance (PERMANOVA) tests, Table 4 contains 16S rRNA Family data (Mean and SD) per group and time point, Table 5 contains 16S rRNA Genus data (Mean and SD) per group and time point, and Table 6 provides 16S rRNA Species data (Mean and SD) per group and time point. Table 7-9 contain non-parametric Mann-Whitney U tests performed at each time point on each pair of study group combination at family level (Table 7), genus level (Table 8), and species level (table 9). Table 10 contains categorization of bacterial families into functional groups (anaerobic/aerobic metabolism and Lactic Acid Bacteria). Table 11 contains KEGG functional annotation and Table 12 contains SEED functional annotation. Raw 16S rRNA data are available at https://www.ebi.ac.uk using accession number PRJEB44790. Shotgun Metagenomics and Metatranscriptomics data are available at https://www.ncbi.nlm.nih.gov under accession number PRJNA726032.
Keywords
Microbiome, Infant, Caesarean section, SynbioticsItem Type | Dataset |
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Capture method | Unknown |
Date | 26 June 2021 |
Language(s) of written materials | English |
Creator(s) | Lay, C, Chu, CW, Purbojati, RW, Acerbi, E, Drautz-Moses, DI, de Sessions, PF, Jie, S, Ho, E, Kok, YJ, Bi, X, Chen, S, Mak, SY, Chua, MC, Goh, AEN, Chiang, WC, Rao, R, Chaithongwongwatthana, S, Khemapech, N, Chongsrisawat, V, Martin, R, Koh, Y, Lohar, SR, Tan, ICH, Anng, WA, Jie, C, Bartke, N, Ben-Amor, K, Renes, IB, Wong, F, Roeselers, G, Ho, YS, Hibberd, ML, Schuster, SC and Knol, J |
LSHTM Faculty/Department | Faculty of Infectious and Tropical Diseases > Dept of Immunology and Infection (-2019) |
Participating Institutions | London School of Hygiene & Tropical Medicine, London, United Kingdom |
Date Deposited | 16 Jul 2021 13:42 |
Last Modified | 20 Jul 2021 14:25 |
Publisher | London School of Hygiene & Tropical Medicine |
Explore Further
- Supplementary Table 01 (Data)
- Supplementary Table 02 (Data)
- Supplementary Table 03 (Data)
- Supplementary Table 04 (Data)
- Supplementary Table 05 (Data)
- Supplementary Table 06 (Data)
- Supplementary Table 07 (Data)
- Supplementary Table 08 (Data)
- Supplementary Table 09 (Data)
- Supplementary Table 10 (Data)
No files available. Please consult associated links.
- Supplementary Table 01 (Data)
- Supplementary Table 02 (Data)
- Supplementary Table 03 (Data)
- Supplementary Table 04 (Data)
- Supplementary Table 05 (Data)
- Supplementary Table 06 (Data)
- Supplementary Table 07 (Data)
- Supplementary Table 08 (Data)
- Supplementary Table 09 (Data)
- Supplementary Table 10 (Data)