Sturt, A, Webb, E and Bustinduy, A. 2021. Data for: "Association of Female Genital Schistosomiasis with the Cervicovaginal Microbiota and Sexually Transmitted Infections in Zambian Women". [Online]. London School of Hygiene & Tropical Medicine, London, United Kingdom. Available from: https://doi.org/10.17037/DATA.00002340.
Sturt, A, Webb, E and Bustinduy, A. Data for: "Association of Female Genital Schistosomiasis with the Cervicovaginal Microbiota and Sexually Transmitted Infections in Zambian Women" [Internet]. London School of Hygiene & Tropical Medicine; 2021. Available from: https://doi.org/10.17037/DATA.00002340.
Sturt, A, Webb, E and Bustinduy, A (2021). Data for: "Association of Female Genital Schistosomiasis with the Cervicovaginal Microbiota and Sexually Transmitted Infections in Zambian Women". [Data Collection]. London School of Hygiene & Tropical Medicine, London, United Kingdom. https://doi.org/10.17037/DATA.00002340.
Description
Studies employing 16S rRNA sequencing to evaluate the cervicovaginal microbiota suggest that high-intensity urinary S. haematobium infection, in the absence of investigation for genital involvement, may alter cervicovaginal microbiota diversity. In addition, studies reporting qPCR-defined FGS have either not investigated or reported STI prevalence or STI prevalence has been correlated with visual FGS findings. In this cross-sectional study we utilized qPCR to detect Schistosoma DNA in the female genital tract and evaluated the association of PCR-defined FGS with the concentration and presence of key markers of the cervicovaginal microbiota, including STI.
The cross-sectional bilharzia and HIV (BILHIV) study was nested in HPTN 071 (PopART), a cluster randomized trial to measure the impact of an HIV-1 combination prevention package. In HPTN 071 (PopART), HIV-1 incidence was measured in a Population Cohort at baseline, 12, 24, and 36 months. Between January and August 2018, after the 36-month HPTN 071 (PopART) visit, community workers made home visits to women expressing interest in the BILHIV study. Eligible women were 18-31 years, not pregnant, sexually active, and resident in one of two urban communities that participated in HPTN 071 (PopART) in Livingstone, Zambia.
Description of data capture | The home visit included assessment of eligibility, a questionnaire, genital self-sampling (cervical and vaginal), and a single urine specimen. Questionnaire data were captured on tablets using Open Data Kit. | ||||||||
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Data capture method | Interview: Face-to-face | ||||||||
Data Collection Period |
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Date (Date submitted to LSHTM repository) | 1 July 2021 | ||||||||
Geographical area covered (offline during plugin upgrade) |
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Language(s) of written materials | English |
Data Creators | Sturt, A, Webb, E and Bustinduy, A |
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LSHTM Faculty/Department | Faculty of Infectious and Tropical Diseases > Dept of Clinical Research |
Participating Institutions | London School of Hygiene & Tropical Medicine, London, United Kingdom |
Funders |
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Date Deposited | 16 Sep 2021 13:28 |
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Last Modified | 16 Sep 2021 13:47 |
Publisher | London School of Hygiene & Tropical Medicine |
Downloads
Data / Code
Restricted to: Request access for all
Filename: Microbiota_data.csv
Description: Microbiota dataset
Licence: Data Sharing Agreement
Content type: Dataset
File size: 41B
Mime-Type: text/plain
Documentation
Filename: Microbiota_data_codebook.html
Description: Codebook for Microbiota data
Content type: Textual content
File size: 16kB
Mime-Type: text/html
Study Instrument
Filename: Microbiota_survey_form.xlsx
Description: Microbiota survey form - MS Excel
Content type: Other
File size: 16kB
Mime-Type: application/vnd.openxmlformats-officedocument.spreadsheetml.sheet