Clifford, S
and Quilty, B
(2020).
cmmid/pcr_test_trace.
[Dataset].
Github.
https://github.com/cmmid/pcr_test_trace
and Quilty, B
(2020).
cmmid/pcr_test_trace.
[Dataset].
Github.
https://github.com/cmmid/pcr_test_trace
The main script to run the analysis is pcr_test_trace.R. Set a name for your results in results_name and then run the rest of the script. Your results will be returned as a list of data frames for each scenario you have run (defined in parameters.R) and saved as a .RDS in /results/"results_name". Figures can be generated by running plots.R and in-text results can be generated by running in_text.R, after checking that your results_name is correct.
Alternative Title
Quarantine and testing strategies in contact tracing for SARS-CoV-2
Keywords
COVID-19; SARS-CoV-2; Coronavirus| Item Type | Dataset |
|---|---|
| Resource Type |
Resource Type Resource Description Software R script |
| Capture method | Compilation/Synthesis |
| Date | 29 October 2020 |
| Language(s) of written materials | English |
| Creator(s) |
Clifford, S and Quilty, B
|
| LSHTM Faculty/Department | Faculty of Epidemiology and Population Health > Dept of Infectious Disease Epidemiology (-2023) |
| Participating Institutions | London School of Hygiene & Tropical Medicine, London, United Kingdom |
| Date Deposited | 22 Jan 2021 09:59 |
| Last Modified | 08 Jun 2026 13:11 |
| Publisher | Github |
No files available. Please consult associated links.
