Comparison of allele frequencies of Plasmodium falciparum merozoite antigens in malaria infections sampled in different years in a Kenyan population

Ochola-Oyier, LI, Okombo, J, Wagatua, N, Ochieng, J, Tetteh, KK, Fegan, G, Bejon, P and Marsh, K. 2016. Comparison of allele frequencies of Plasmodium falciparum merozoite antigens in malaria infections sampled in different years in a Kenyan population. [Online]. Malaria Journal. Available from: https://doi.org/10.1186/s12936-016-1304-8.

Ochola-Oyier, LI, Okombo, J, Wagatua, N, Ochieng, J, Tetteh, KK, Fegan, G, Bejon, P and Marsh, K. Comparison of allele frequencies of Plasmodium falciparum merozoite antigens in malaria infections sampled in different years in a Kenyan population. [Internet] LSHTM Data Compass. Malaria Journal; 2016. Available from: https://doi.org/10.1186/s12936-016-1304-8.

Ochola-Oyier, LI, Okombo, J, Wagatua, N, Ochieng, J, Tetteh, KK, Fegan, G, Bejon, P and Marsh, K (2016). Comparison of allele frequencies of Plasmodium falciparum merozoite antigens in malaria infections sampled in different years in a Kenyan population. [Data Collection]. Malaria Journal. https://doi.org/10.1186/s12936-016-1304-8.

Description

Data capture method Experiment
Data Collection Period
FromTo
20072009
Date (Published in a 3rd party system) 6 May 2016
Geographical area covered
North LatitudeEast LongitudeSouth LatitudeWest Longitude
-3.3692739.9332-3.625639.8042
Language(s) of written materials English
Data Creators Ochola-Oyier, LI, Okombo, J, Wagatua, N, Ochieng, J, Tetteh, KK, Fegan, G, Bejon, P and Marsh, K
LSHTM Faculty/Department Faculty of Infectious and Tropical Diseases > Dept of Immunology and Infection
Participating Institutions KEMRI-Wellcome Trust Collaborative Programme, London School of Hygiene & Tropical Medicine
Depositor Gareth Knight
Date Deposited 18 May 2016 11:34
Last Modified 05 Aug 2016 15:59
Publisher Malaria Journal

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Data

Filename: File1-PCRconditions_and_PrimerSequences.xlsx

Description: PCR conditions and primer sequences for the gene regions analysed in the 15 merozoite genes

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File size: 17kB

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Filename: File2-Merozoite_gene.docx

Description: Merozoite gene allele frequencies in the uncomplicated malaria infections between 2007 and 2008

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File size: 21kB

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Filename: File3-genotypeParasitePairs.docx

Description: The proportion of same and different genotype parasite pairs in vivo and in vitro

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File size: 21kB

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Filename: File4-LD_analysis.xlsx

Description: Linkage disequilibrium (LD) analysis of all high frequency (>5%) SNPs in all 15 merozoite genes, except eba181 due to limited SNP data

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Content type: Dataset

File size: 347kB

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Filename: File5-SNPs_RepeatRegionFrequencies.xlsx

Description: SNPs and repeat region frequencies within the 15 merozoite genes from the uncomplicated malaria infections in 2007 and 2008 to identify significant SNPs

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File size: 47kB

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Filename: File6_Rh5_SNPs.docx

Description: Rh5 SNPs in 11 geographically distinct laboratory isolates

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Content type: Dataset

File size: 12kB

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