Data Collection

Diallo, K, Gamougam, K, Daugla, DM, Harrison, OB, Bray, JE, Caugant, DA, Lucidarme, J, Trotter, CL, Hassan-King, M, Stuart, JM, Manigart, O, Greenwood, BM and Maiden, MCJ (2017). Hierarchical genomic analysis of carried and invasive serogroup A Neisseria meningitidis during the 2011 epidemic in Chad. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.3785438

Gröschel, MI, Owens, M, Freschi, L, Vargas, R, Marin, MG, Phelan, J, Iqbal, Z, Dixit, A and Farhat, MR (2021). Additional file 1 of GenTB: A user-friendly genome-based predictor for tuberculosis resistance powered by machine learning. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.16544185.v1

Musicha, P, Msefula, CL, Mather, AE, Chaguza, C, Cain, AK, Peno, C, Kallonen, T, Khonga, M, Denis, B, Gray, KJ, Heyderman, RS, Thomson, NR, Everett, DB and Feasey, NA (2019). Genomic analysis of Klebsiella pneumoniae isolates from Malawi reveals acquisition of multiple ESBL determinants across diverse lineages. [Data Collection]. Journal of Antimicrobial Chemotherapy. https://doi.org/10.1093/jac/dkz032

Phelan, J and Manko, E (2023). jodyphelan/malaria-db. [Data Collection]. GitHub. https://github.com/jodyphelan/malaria-db

Phelan, J and Thorpe, J (2023). jodyphelan/malaria-profiler. [Data Collection]. GitHub. https://github.com/jodyphelan/Malaria-Profiler

Runcharoen, C, Moradigaravand, D, Blane, B, Paksanont, S, Thammachote, J, Anun, S, Parkhill, J, Chantratita, N and Peacock, SJ (2017). Whole genome sequencing reveals high-resolution epidemiological links between clinical and environmental Klebsiella pneumoniae. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.3673891

Saeed, DK, Shakoor, S, Razzak, SA, Hasan, Z, Sabzwari, SF, Azizullah, Z, Kanji, A, Nasir, A, Shafiq, S, Ghanchi, NK and Hasan, R (2022). Variants associated with Bedaquiline (BDQ) resistance identified in Rv0678 and efflux pump genes in Mycobacterium tuberculosis isolates from BDQ naïve TB patients in Pakistan. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.c.5861725.v1

Saralamba, N, Nosten, F, Sutherland, CJ, Paula Arez, A, Snounou, G, White, NJ, Day, NP, Dondorp, AM and Imwong, M (2019). Genetic dissociation of three antigenic genes in Plasmodium ovale curtisi and Plasmodium ovale wallikeri. [Data Collection]. PLOS One. https://doi.org/10.1371/journal.pone.0217795

Weill, F, Domman, D, Njamkepo, E, Tarr, C, Rauzier, J, Fawal, N, Keddy, KH, Salje, H, Moore, S, Mukhopadhyay, AK, Bercion, R, Luquero, FJ, Ngandjio, A, Dosso, M, Monakhova, E, Garin, B, Bouchier, C, Pazzani, C, Mutreja, A, Grunow, R, Sidikou, F, Bonte, L, Breurec, S, Damian, M, Njanpop-Lafourcade, B, Sapriel, G, Page, A, Hamze, M, Henkens, M, Chowdhury, G, Mengel, M, Koeck, J, Fournier, J, Dougan, G, Grimont, PAD, Parkhill, J, Holt, KE, Piarroux, R, Ramamurthy, T, Quilici, M and Thomson, NR (2017). Genomic history of the seventh pandemic of cholera in Africa. [Data Collection]. Figshare. https://doi.org/10.6084/m9.figshare.5314822.v3