Item Type Date Title No Grouping

Pre-vaccination carriage prevalence of Streptococcus pneumoniae serotypes among internally displaced people in Somaliland. Data and analyses. (2024) Van zandvoort, Kevin; Hassan, Abdirahman Ibrahim; Bobe, Mohamed Omer; Pell, Casey L; Ahmed, Mohamed Saed; Ortika, Belinda D; Ibrahim, Saed; Abdi, Mohamed Ismail; Karim, Mustapha A; Eggo, Rosalind M.; Yusuf, Sulieman; Hinds, Jason; Soleman, Saeed Mohamood; Cummings, Rachael; Mcgowan, Catherine R; Mulholland, E Kim; Satzke, Catherine; Hergeeye, Mohamed Abdi; Checchi, Francesco; Flasche, Stefan

finalsize: Calculate the Final Size of an Epidemic. (2024) Gupte, Pratik; Van Leeuwen, Edwin; Kucharski, Adam; Eggo, Rosalind M.; Gruson, Hugo; Jombart, Thibaut; Valle Campos, Andree; Lambert, Joshua W.

cmmid/covidm_reports: HEA Snapshot. (2023) Pearson, Carl A. B.; Thompson, Sam; Van Zandvoort, Kevin; Eggo, Rosalind M.; Jarvis, Christopher I.

epiverse-trace. (2023) Pavlich-Mariscal, Jaime; Eggo, Rosalind M.; Kucharski, Adam J.; Gruson, Hugo; Russell, Timothy W.; Valle Campos, Andree; Cucunubá, Zulma M.; Santos-Vega, Mauricio; Gupte, Pratik; Azam, James; Torres Domínguez, Nicolás; Lambert, Joshua; Gomez, Geraldine; Umaña, Juan D.; Quevedo-Vega, David Santiago; Gámez López, Miguel Enrique; Carnegie, Anna

yangclaraliu/covid_vac_africa: BMCMed_R3. (2023) Liu, Yang; Procter, Simon R; Pearson, Carl A. B.; Madriz Montero, Andres; Torres-Rueda, Sergio; Asfaw, Elias; Uzochukwu, Benjamin; Drake, Tom; Bergren, Eleanor; Eggo, Rosalind M.; Ruiz, Francis; Ndembi, Nicaise; Nonvignon, Justice; Jit, Mark; Vassall, Anna

kevinvzandvoort/espicc-somaliland-digaale-survey-2019. (2022) van zandvoort, Kevin; Bobe, Mohamed Omer; Hassan, Abdirahman Ibrahim; Abdi, Mohamed Ismail; Ahmed, Mohammed Saed; Soleman, Saeed Mohamood; Warsame, Mohamed Yusuf; Wais, Muna Awil; Diggle, Emma; McGowan, Catherine R; Satzke, Catherine; Mulholland, Kim; Egeh, Mohamed Mohamoud; Hassan, Mukhtar Muhumed; Hergeeye, Mohamed Abdi; Eggo, Rosalind M; Checchi, Francesco; Flasche, Stefan

Social contacts and other risk factors for respiratory infections among internally displaced people in Somaliland. Data and analyses. (2022) Van Zandvoort, Kevin; Bobe, Mohamed Omer; Hassan, Abdirahman Ibrahim; Abdi, Mohamed Ismail; Ahmed, Mohammed Saed; Soleman, Saeed Mohamood; Warsame, Mohamed Yusuf; Wais, Muna Awil; Diggle, Emma; Satzke, Catherine; Mulholland, Kim; Egeh, Mohamed Mohamoud; Hassan, Mukhtar Muhumed; Hergeeye, Mohamed Abdi; Eggo, Rosalind M.; Checchi, Francesco; Flasche, Stefan; Mcgowan, Catherine R.

hamishgibbs/facebook_population_2020_2021. (2022) Gibbs, Hamish; Waterlow, Naomi R.; Cheshire, James; Danon, Leon; Liu, Yang; Grundy, Chris; Kucharski, Adam J.; Eggo, Rosalind M.

cmmid/coronavirus_immunity. (2021) Waterlow, Naomi R.; Van Leeuwen, Edwin; Davies, Nicholas; Flasche, Stefan; Eggo, Rosalind M.

Social contact data for IDPs in Somaliland (2019). (2021) Van Zandvoort, Kevin; Bobe, Mohamed Omer; Hassan, Abdirahman Ibrahim; Abdi, Mohamed Ismail; Ahmed, Mohamed Saed; Warsame, Mohamed Yusuf; Wais, Muna Awil; Diggle, Emma; Satzke, Catherine; Mulholland, Kim; Egeh, Mohamed Mohamoud; Hassan, Mukhtar Muhumed; Hergeeye, Mohamed Abdi; Eggo, Rosalind M.; Checchi, Francesco; Flasche, Stefan

Simulation results for "COVID-19 vaccination in Sindh Province, Pakistan: a modelling study of health impact and cost-effectiveness". (2021) Pearson, Carl A B; Bozzani, Fiammetta; Procter, Simon R; Davies, Nicholas G; Huda, Maryam; Jensen, Henning Tarp; Keogh-Brown, Marcus; Khalid, Muhammad; Sweeney, Sedona; Torres-Rueda, Sergio; Eggo, Rosalind M; Vassall, Anna; Jit, Mark

Data for: "Vaccine Confidence and Hesitancy at the start of COVID-19 vaccine deployment in the UK: An embedded mixed-methods study". (2021) Roberts, Chrissy; Brindle, Hannah; Rogers, Nina; Eggo, Rosalind M.; Enria, Luisa; Lees, Shelley description

Population disruption: estimating changes in population distribution in the UK during the COVID-19 pandemic - Estimates for Local Authority Districts. (2021) Gibbs, Hamish; Waterlow, Naomi R.; Cheshire, James; Danon, Leon; Liu, Yang; Grundy, Chris; Kucharski, Adam J.; Eggo, Rosalind M.

Analysis data and code for "Estimated transmissibility and impact of SARS-CoV-2 lineage B.1.1.7 in England". (2021) Davies, Nicholas G.; Abbott, Sam; Barnard, Rosanna C.; Jarvis, Christopher I.; Kucharski, Adam J.; Munday, James; Pearson, Carl A. B.; Russell, Timothy W.; Tully, Damien C.; Washburne, Alex D.; Wenseleers, Tom; Gimma, Amy; Waites, William; Wong, Kerry LM; van Zandvoort, Kevin; Silverman, Justin D.; Diaz-Ordaz, Karla; Keogh, Ruth; Eggo, Rosalind M.; Funk, Sebastian; Jit, Mark; Atkins, Katherine E.; Edmunds, W. John

Analysis data and code for "Estimated transmissibility and impact of SARS-CoV-2 Variant of Concern 202012/01 in England". (2021) Davies, Nicholas G.; Abbott, Sam; Barnard, Rosanna C.; Jarvis, Christopher I.; Kucharski, Adam J.; Munday, James; Pearson, Carl A. B.; Russell, Timothy W.; Tully, Damien C.; Washburne, Alex D.; Wenseleers, Tom; Gimma, Amy; Waites, William; Wong, Kerry LM; van Zandvoort, Kevin; Silverman, Justin D.; Diaz-Ordaz, Karla; Keogh, Ruth; Eggo, Rosalind M.; Funk, Sebastian; Jit, Mark; Atkins, Katherine E.; Edmunds, W. John

Extremely high SARS-CoV-2 seroprevalence in a strictly-Orthodox Jewish community in the UK. (2021) Gaskell, Katherine M.; Johnson, Marina; Gould, Victoria; Hunt, Adam; Stone, Neil RH; Waites, William; Kasstan, Ben; Chantler, Tracey; Lal, Sham; Roberts, Chrissy h.; Goldblatt, David; Eggo, Rosalind M.; Marks, Michael

Trust and Transparency in times of Crisis: Results from an Online Survey During the First Wave (April 2020) of the COVID-19 Epidemic in the UK - Quantitative Data. (2021) Enria, Luisa; Waterlow, Naomi; Rogers, Nina; Brindle, Hannah; Lal, Sham; Eggo, Rosalind M.; Lees, Shelley; Roberts, Chrissy

uk_tier_data. (2021) Gibbs, Hamish; Jarvis, Christopher I.; Eggo, Rosalind M.

Trust and Transparency in times of Crisis: Results from an Online Survey During the First Wave (April 2020) of the COVID-19 Epidemic in the UK. (2020) Enria, Luisa; Waterlow, Naomi; Rogers, Nina; Brindle, Hannah; Lal, Sham; Eggo, Rosalind M.; Lees, Shelley; Roberts, Chrissy

Trust and Transparency in times of Crisis: Results from an Online Survey During the First Wave (April 2020) of the COVID-19 Epidemic in the UK - Qualitative Data. (2020) Enria, Luisa; Waterlow, Naomi; Rogers, Nina; Brindle, Hannah; Lal, Sham; Eggo, Rosalind M.; Lees, Shelley; Roberts, Chrissy description

Additional file 1 of Seasonal influenza vaccination in Kenya: an economic evaluation using dynamic transmission modelling. (2020) Dawa, Jeanette; Emukule, Gideon O.; Barasa, Edwine; Widdowson, Marc Alain; Anzala, Omu; Van leeuwen, Edwin; Baguelin, Marc; Chaves, Sandra S.; Eggo, Rosalind M.

Additional file 3 of Seasonal influenza vaccination in Kenya: an economic evaluation using dynamic transmission modelling. (2020) Dawa, Jeanette; Emukule, Gideon O.; Barasa, Edwine; Widdowson, Marc Alain; Anzala, Omu; Van Leeuwen, Edwin; Baguelin, Marc; Chaves, Sandra S.; Eggo, Rosalind M.

UK prevalence of risk factors for severe COVID-19 disease, by age and region: point prevalence estimates in 2019 and 2014, using electronic health records. (2020) Walker, Jemma; Grint, Daniel; Strongman, Helen; Eggo, Rosalind M.; Peppa, Maria; Minassian, Caroline; Mansfield, Kathryn E.; Rentsch, Christopher; Douglas, Ian J.; Mathur, Rohini; Wong, Angel; Quint, Jennifer K.; Andrews, Nick; Lopez-bernal, James; Scott, Anthony; Ramsay, Mary; Smeeth, Liam; McDonald, Helen folder_zip

cmmid/travel_screening_strategies. (2020) Clifford, Samuel; Quilty, Billy J.; Russell, Timothy W.; Liu, Yang; Chan, Yung-Wai Desmond; Pearson, Carl A. B.; Eggo, Rosalind M.; Endo, Akira; CMMID COVID-19 Working Group; Flasche, Stefan; Edmunds, W. John

Reconstructing the global dynamics of unreported COVID-19 cases and infections. (2020) Russell, Timothy W.; Golding, Nick; Hellewell, Joel; Abbott, Sam; Pearson, Carl A B; Van zandvoort, Kevin; Jarvis, Christopher I; Gibbs, Hamish; Liu, Yang; Eggo, Rosalind M.; Edmunds, W. John; Kucharski, Adam J.; CMMID COVID-19 working group

Projections of COVID-19 epidemics in LMIC countries. (2020) Pearson, Carl A. B.; Van zandvoort, Kevin; Jarvis, Christopher I.; Davies, Nicholas G.; Thompson, Sam; Checchi, Francesco; Jit, Mark; Eggo, Rosalind M.; LSHTM CMMID COVID-19 Working Group

UK Colocation Dashboard. (2020) Gibbs, Hamish; CMMID nCov Working Group; Eggo, Rosalind M.; Grundy, Chris; Kucharski, Adam J.

cmmid/covid-uk. (2020) Davies, Nicholas G; Kucharski, Adam J.; Eggo, Rosalind M; Gimma, Amy; COVID-19 Working Group; Edmunds, W. John

Estimating the infection and case fatality ratio for COVID-19 using age-adjusted data from the outbreak on the Diamond Princess cruise ship. (2020) Russell, Timothy W.; Hellewell, Joel; Jarvis, Christopher I.; Van-Zandvoort, Kevin; Abbott, Sam; Ratnayake, Ruwan; Flasche, Stefan; Eggo, Rosalind M; Kucharski, Adam J.

thimotei/CFR_calculation. (2020) Russell, Timothy W.; Hellewell, Joel; Abbott, Sam; Jarvis, Christopher; Zandvoort, Kevin van; Ratnayake, Ruwan; CMMID nCov working group; Flasche, Stefan; Eggo, Rosalind M.; Edmunds, W. John; Kucharski, Adam J.

Age-structured SEIR model for COVID-19 outbreak in Wuhan, China. (2020) Prem, Kiesha; Liu, Yang; Russell, Timothy W; Kucharski, Adam J; Eggo, Rosalind M; Davies, Nicholas G; Jit, Mark; Klepac, Petra; Flasche, Stefan; Clifford, Samuel; Pearson, Carl A B; Munday, James D; Abbott, Sam; Gibbs, Hamish; Rosello, Alicia; Quilty, Billy J; Jombart, Thibaut; Sun, Fiona; Diamond, Charlie; Gimma, Amy; Van zandvoort, Kevin; Funk, Sebastian; Jarvis, Christopher I; Edmunds, W John; Bosse, Nikos I; Hellewell, Joel

Inferring COVID-19 cases from deaths of confirmed cases. (2020) Jombart, Thibaut; Abbott, Sam; Gimma, Amy; Zandvoort, Kevin; Clifford, Samuel; Jarvis, Christopher; Russell, Timothy; Funk, Sebastian; Gibbs, Hamish; Eggo, Rosalind M.; Kucharski, Adam J.; CMMID COVID-19 Working Group; Edmunds, W. John

Feasibility of controlling COVID-19 outbreaks by isolation of cases and contacts. (2020) Hellewell, Joel; Abbott, Sam; Gimma, Amy; Bosse, Nikos; Jarvis, Christopher; Russell, Timothy; Munday, James; Kucharski, Adam; Edmunds, W John; Funk, Sebastian; Eggo, Rosalind; Sun, Fiona; Flasche, Stefan; Quilty, Billy; Davies, Nicholas; Liu, Yang; Clifford, Samuel; Klepac, Petra; Jit, Mark; Diamond, Charlie; Gibbs, Hamish; Van Zandvoort, Kevin

Probability of a large 2019-nCoV outbreak following introduction of cases. (2020) Kucharski, Adam J.; Russell, Timothy W.; Diamond, Charlie; CMMID nCoV working group; Funk, Sebastian; Eggo, Rosalind M.

Effectiveness of airport-based interventions at detecting travellers and delaying an outbreak of COVID-19 (formerly 2019-nCoV). (2020) Clifford, Samuel; Quilty, Billy; CMMID nCoV working group; Pearson, Carl; Flasche, Stefan; Eggo, Rosalind M.

Computer code of the coinfection model. (2018) Eggo, Rosalind M. description

S1 Dataset for "Transmission Dynamics of Zika Virus in Island Populations: A Modelling Analysis of the 2013–14 French Polynesia Outbreak". (2016) Kucharski, Adam J.; Funk, Sebastian; Eggo, Rosalind M.; Mallet, Henri-Pierre; Edmunds, W. John; Nilles, Eric J. description