Item Type Date No Grouping

Dataset

EpiNow2: Estimate Real-Time Case Counts and Time-Varying Epidemiological Parameters. (2024) Abbott, Sam, Hellewell, Joel, Sherratt, Katharine, Gostic, Katelyn, Hickson, Joe, Badr, Hamada S., DeWitt, Michael, Azam, James M., EpiForecasts, Funk, Sebastian

thimotei/legacy_ct_modelling: Final version. (2023) Abbott, Sam, Russell, Timothy W., Hellewell, Joel, Kucharski, Adam J.

epiforecasts/ringbp. (2023) Abbott, Sam, Hellewell, Joel, Lucas, Tim, Funk, Sebastian, Gimma, Amy

mrc-ide/deterministic-malaria-model: nets_paper. (2023) Unwin, Juliette, Challenger, Joseph, Watson, O. J., Hellewell, Joel, FitzJohn, Rich, Sherrard-Smith, Ellie

R code for: "Confirmatory testing with a second lateral flow test may mitigate false positives at low levels of SARS-CoV-2 prevalence in English schools". (2021) Quilty, Billy J, Hellewell, Joel, Clifford, Samuel, CMMID COVID-19 working group description

cmmid/pcr-profile. (2020) Hellewell, Joel, Russell, Timothy W., The SAFER Investigators and Field Study Team, The Crick COVID-19 Consortium, CMMID COVID-19 working group, Beale, Rupert, Kelly, Gavin, Houlihan, Catherine, Nastouli, Eleni, Kucharski, Adam J.

timcdlucas/ringbp: Code as used in the paper "Engagement and adherence trade-offs for SARS-CoV-2 contact tracing". (2020) Hellewell, Joel, Lucas, Tim, Davis, Emma, Abbott, Sam, Gimma, Amy, Thompson, Robin

Reconstructing the global dynamics of unreported COVID-19 cases and infections. (2020) Russell, Timothy W., Golding, Nick, Hellewell, Joel, Abbott, Sam, Pearson, Carl A B, Van zandvoort, Kevin, Jarvis, Christopher I, Gibbs, Hamish, Liu, Yang, Eggo, Rosalind M., Edmunds, W. John, Kucharski, Adam J., CMMID COVID-19 working group

epiforecasts/covid: Submission release. (2020) Abbott, Sam, Sherratt, Katharine, Funk, Sebastian, Hellewell, Joel

epiforecasts/EpiSoon. (2020) Abbott, Sam, Bosse, Nikos, DeWitt, Michael, Rau, Andrea, Chateigner, Aurelien, Mareschal, Sylvain, Hellewell, Joel

epiforecasts/NCoVUtils. (2020) Abbott, Sam, Sherratt, Katharine, Gibbs, Hamish, Finger, Flavio, Campbell, Paul, Hellewell, Joel, Barks, Patrick, Meakin, Sophie, Lee, Haze

Estimating the infection and case fatality ratio for COVID-19 using age-adjusted data from the outbreak on the Diamond Princess cruise ship. (2020) Russell, Timothy W., Hellewell, Joel, Jarvis, Christopher I., Van-Zandvoort, Kevin, Abbott, Sam, Ratnayake, Ruwan, Flasche, Stefan, Eggo, Rosalind M, Kucharski, Adam J.

thimotei/CFR_calculation. (2020) Russell, Timothy W., Hellewell, Joel, Abbott, Sam, Jarvis, Christopher, Zandvoort, Kevin van, Ratnayake, Ruwan, CMMID nCov working group, Flasche, Stefan, Eggo, Rosalind M., Edmunds, W. John, Kucharski, Adam J.

Age-structured SEIR model for COVID-19 outbreak in Wuhan, China. (2020) Prem, Kiesha, Liu, Yang, Russell, Timothy W, Kucharski, Adam J, Eggo, Rosalind M, Davies, Nicholas G, Jit, Mark, Klepac, Petra, Flasche, Stefan, Clifford, Samuel, Pearson, Carl A B, Munday, James D, Abbott, Sam, Gibbs, Hamish, Rosello, Alicia, Quilty, Billy J, Jombart, Thibaut, Sun, Fiona, Diamond, Charlie, Gimma, Amy, Van zandvoort, Kevin, Funk, Sebastian, Jarvis, Christopher I, Edmunds, W John, Bosse, Nikos I, Hellewell, Joel

Feasibility of controlling COVID-19 outbreaks by isolation of cases and contacts. (2020) Hellewell, Joel, Abbott, Sam, Gimma, Amy, Bosse, Nikos, Jarvis, Christopher, Russell, Timothy, Munday, James, Kucharski, Adam, Edmunds, W John, Funk, Sebastian, Eggo, Rosalind, Sun, Fiona, Flasche, Stefan, Quilty, Billy, Davies, Nicholas, Liu, Yang, Clifford, Samuel, Klepac, Petra, Jit, Mark, Diamond, Charlie, Gibbs, Hamish, Van Zandvoort, Kevin

cmmid/ringbp. (2020) Hellewell, Joel

epiforecasts/WuhanSeedingVsTransmission: Resubmission to Wellcome Open Research. (2020) Abbott, Sam, Funk, Sebastian, Munday, James D., Hellewell, Joel

Wuhan Seeding Vs Transmission. (2020) Abbott, Sam, Funk, Sebastian, Munday, James D., Hellewell, Joel

Pathways to Low Fertility. (2020) Abbott, Sam, Funk, Sebastian, Munday, James D., Hellewell, Joel

Data from: Examining the human infectious reservoir for Plasmodium falciparum malaria in areas of differing transmission intensity. (2018) Gonçalves, Bronner P., Kapulu, Melissa C., Sawa, Patrick, Guelbéogo, Wamdaogo M., Tiono, Alfred B., Grignard, Lynn, Stone, Will J. R., Hellewell, Joel, Lanke, Kjerstin, Bastiaens, Guido J. H., Bradley, John, Nébié, Issa, Ngoi, Joyce M., Oriango, Robin, Mkabili, Dora, Nyaurah, Maureen, Midega, Janet, Wirth, Dyann F., Marsh, Kevin, Churcher, Thomas S., Bejon, Philip, Sirima, Sodiomon B., Drakeley, Chris, Bousema, Teun