Ojal, J, Brand, SPC, Were, V, Okiro, EA, Kombe, IK, Mburu, C, Aziza, R, Ogero, M, Agweyu, A, Warimwe, GM, Uyoga, S, Adetifa, IM, Scott, JAG, Otieno, E, Ochola-Oyier, LI, Agoti, CN, Kasera, K, Amoth, P, Mwangangi, M, Aman, R, Ng’ang’a, W, Tsofa, B, Bejon, P, Barasa, E, Keeling, MJ and Nokes, DJ. 2020. Replication Data for: Revealing the extent of the COVID-19 pandemic in Kenya based on serological and PCR-test data. [Online]. Harvard Dataverse. Available from: https://doi.org/10.7910/DVN/RXAIPS
Ojal, J, Brand, SPC, Were, V, Okiro, EA, Kombe, IK, Mburu, C, Aziza, R, Ogero, M, Agweyu, A, Warimwe, GM, Uyoga, S, Adetifa, IM, Scott, JAG, Otieno, E, Ochola-Oyier, LI, Agoti, CN, Kasera, K, Amoth, P, Mwangangi, M, Aman, R, Ng’ang’a, W, Tsofa, B, Bejon, P, Barasa, E, Keeling, MJ and Nokes, DJ. Replication Data for: Revealing the extent of the COVID-19 pandemic in Kenya based on serological and PCR-test data [Internet]. Harvard Dataverse; 2020. Available from: https://doi.org/10.7910/DVN/RXAIPS
Ojal, J, Brand, SPC, Were, V, Okiro, EA, Kombe, IK, Mburu, C, Aziza, R, Ogero, M, Agweyu, A, Warimwe, GM, Uyoga, S, Adetifa, IM, Scott, JAG, Otieno, E, Ochola-Oyier, LI, Agoti, CN, Kasera, K, Amoth, P, Mwangangi, M, Aman, R, Ng’ang’a, W, Tsofa, B, Bejon, P, Barasa, E, Keeling, MJ and Nokes, DJ (2020). Replication Data for: Revealing the extent of the COVID-19 pandemic in Kenya based on serological and PCR-test data. [Data Collection]. Harvard Dataverse. https://doi.org/10.7910/DVN/RXAIPS
Description
This is a replication dataset for the submitted manuscript "Ojal, J., Brand, S.P., Were, V., Okiro, E.A., Kombe, I.K., Mburu, C., Aziza, R., Ogero, M., Agweyu, A., Warimwe, G.M. and Uyoga, S., 2020. Revealing the extent of the COVID-19 pandemic in Kenya based on serological and PCR-test data. medRxiv.".
The related study was conducted to estimate the SARS-CoV-2 pandemic peak and COVID-19 disease burden including reported severe cases and deaths in the major urban counties in Kenya. National surveillance PCR tests, serological surveys, and mobility data were used to develop and fit a county-specific transmission model in the country.
These datasets presented contain the number of positive PCR-confirmed swab tests for each county by date of sample collection (21st Feb to 6th August), the number of positive and negative serological results for each county by date of sample collection (21st Feb to 6th August), number of deaths with a PCR-confirmed swab test for each county by recorded date of death (21st Feb to 6th August), the total number of swab samples collected in Mombasa county, and analyzed at Kemri-Wellcome Research Program testing center (21st Feb – 27th June), and summary data of Kenyan epidemic, including reported total number of test performed. The datasets are used for COVID-19 forecasts.
Keywords
| Data capture method | Unknown |
|---|---|
| Date (Date published in a 3rd party system) | 17 September 2020 |
| Language(s) of written materials | English |
| Data Creators | Ojal, J, Brand, SPC, Were, V, Okiro, EA, Kombe, IK, Mburu, C, Aziza, R, Ogero, M, Agweyu, A, Warimwe, GM, Uyoga, S, Adetifa, IM, Scott, JAG, Otieno, E, Ochola-Oyier, LI, Agoti, CN, Kasera, K, Amoth, P, Mwangangi, M, Aman, R, Ng’ang’a, W, Tsofa, B, Bejon, P, Barasa, E, Keeling, MJ and Nokes, DJ |
|---|---|
| LSHTM Faculty/Department | Faculty of Epidemiology and Population Health > Dept of Infectious Disease Epidemiology |
| Participating Institutions | London School of Hygiene & Tropical Medicine, London, United Kingdom |
| Date Deposited | 22 Apr 2022 11:36 |
|---|---|
| Last Modified | 22 Apr 2022 11:36 |
| Publisher | Harvard Dataverse |
