Characterizing the Transmission Potential of Zoonotic Infections from Minor Outbreaks: Simulation and Inference code

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Kucharski, A and Edmunds, J. 2015. Characterizing the Transmission Potential of Zoonotic Infections from Minor Outbreaks: Simulation and Inference code. [Online]. London School of Hygiene & Tropical Medicine, London, United Kingdom. Available from: 10.1371/journal.pcbi.1004154.s010

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Simulation and inference code written in R which generates stochastic multi type outbreaks from a two-class mixing matrix. The inference model generates maximum likelihood estimates of R0 and S from outbreak size data.

Published in a 3rd party system Date: 10 April 2015
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Simulation
Data Creators(s): Kucharski, A and Edmunds, J
LSHTM Faculty/Department: Faculty of Epidemiology and Population Health > Dept of Infectious Disease Epidemiology
Participating Institutions: London School of Hygiene & Tropical Medicine

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