Characterizing the Transmission Potential of Zoonotic Infections from Minor Outbreaks: Simulation and Inference code
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Kucharski, A and Edmunds, J. 2015. Characterizing the Transmission Potential of Zoonotic Infections from Minor Outbreaks: Simulation and Inference code. [Online]. London School of Hygiene & Tropical Medicine, London, United Kingdom. Available from: 10.1371/journal.pcbi.1004154.s010
Description
Simulation and inference code written in R which generates stochastic multi type outbreaks from a two-class mixing matrix. The inference model generates maximum likelihood estimates of R0 and S from outbreak size data.
| Published in a 3rd party system Date: | 10 April 2015 | ||
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| Data Creators(s): | Kucharski, A and Edmunds, J | ||
| LSHTM Faculty/Department: | Faculty of Epidemiology and Population Health > Dept of Infectious Disease Epidemiology | ||
| Participating Institutions: | London School of Hygiene & Tropical Medicine | ||
Related resources
- PLOS Computational Biology (Other)
- Figshare Digital Repository (Other)
LSHTM Open Access publications:
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