Variable |
Description |
Coding |
age |
Participant age in years |
Continuous numeric |
sex |
Participant gender |
1 = Male; 2 = Female |
right_eye_TT |
Does the participant have the sign TT in the right eye? |
0 = No; 1 = Yes; 2 = Unable to examine |
right_eye_TF |
Does the participant have the sign TF in the right eye? |
0 = No; 1 = Yes; 2 = Unable to examine |
right_eye_TI |
Does the participant have the sign TI in the right eye? |
0 = No; 1 = Yes; 2 = Unable to examine |
left_eye_TT |
Does the participant have the sign TT in the left eye? |
0 = No; 1 = Yes; 2 = Unable to examine |
left_eye_TF |
Does the participant have the sign TF in the left eye? |
0 = No; 1 = Yes; 2 = Unable to examine |
left_eye_TI |
Does the participant have the sign TI in the left eye? |
0 = No; 1 = Yes; 2 = Unable to examine |
consensus_f |
Photograph F grade - see manuscript for grading scheme detail |
0 = Absent; 1 = Mild; 2 = Moderate; 3 = Severe |
consensus_p |
Photograph P grade - see manuscript for grading scheme detail |
0 = Absent; 1 = Mild; 2 = Moderate; 3 = Severe |
consensus_c |
Photograph C grade - see manuscript for grading scheme detail |
0 = Absent; 1 = Mild; 2 = Moderate; 3 = Severe |
comment_atypical |
Whether photograders specifically noted C2/C3 grades were atypical of trachomatous scarring |
0 = No; 1 = Yes |
OD_200_norm |
Optical density at 450nm, normalised to 20% dilution of high-titre serum in low-titre serum |
Continuous numeric |
pgp3_result |
Is the participant antibody levels above the specified positivity threshold? |
0 = No; 1 = Yes |
Ct_plasmid_result |
Did the participant's conjunctival swab have a positive Chlamydia trachomatis plasmid ddPCR result? |
0 = No; 1 = Yes |
Hs_RPP30_result |
Did the participant's conjunctival swab have a positive endogenous control ddPCR result? |
0 = No; 1 = Yes |
Ct_plasmid_copies_swab |
Chlamydia trachomatis plasmid load (number of copies per swab) |
Continuous numeric |
Hs_RPP30_copies_swab |
Endogenous control load (number of copies per swab) |
Continuous numeric |
province |
Which province does the participant live in? |
Text field |