10.17037/DATA.00005164
SEEP study data on inflammatory markers in schistosomiasis
Anonymized dataset of 354 pre-school age children (PSAC) with Schistosoma mansoni infection and 61 schistosomiasis-negative PSAC from Albertine Region of Western Uganda. Participants were recruited between April 2021 and February 2023. Dataset includes demographic variables, schistosomiasis infection parameters, anthropometric data as well as intestinal and systemic inflammatory markers.
Demographic data was obtained through completion of interview questionnaires. Anthropometric measurements (weight and height) yielded primary data that was used to calculate height-for-age z-scores, weight-for-age z-scores and weight-for-height z-scores. Intestinal and systemic markers were obtained from stool, urine and plasma samples through Enzyme-Linked Immunosorbent Assay (ELISA) and High-Pressure Liquid Chromatography (HPLC).
Data cleaning was done in REDCap database where the initial entry was made and exported to STATA 19 for analysis. Descriptive analysis was done followed by crude and adjusted regression models to assess association between schistosomiasis infection status and inflammatory markers.
Hoima District and Buliisa District in Albertine Region of Uganda.
Data was collected between April 2021 and February 2023. Laboratory assays were conducted between April 2021 and April 2024, followed by statistical analysis from May 2024 to July 2024.
Staff were trained in data management and data was entered into REDCap database with checks. During data collection, the Data Manager ran data quality checks and raised queries for the attention of the field data collectors, who verified any discrepancies and responded accordingly.
Preschool age children aged 12-47 months. One group of 354 participants were infected with Schistosoma mansoni, and a comparison group of 61 participants were negative for Schistosoma mansoni. For infected participants, baseline samples from the Praziquantel for children under age four years: A Phase II PK/PD driven dose finding trial (PIP trial) for schistosomiasis-infected group. The uninfected comparison group was purposely recruited for the SEEP Study.
Anonymized electronic data was entered in REDCap and each data collector used a password-protected account. Hard copies such as consent forms were kept in lockable cabinets with restricted access.
| Organisation | Ethics ID | Other information |
| Uganda Virus Research Institute Research Ethics Committee (UVRI REC) | GC/127/914 | |
| Uganda National Council for Science and Technology (UNCST) | HS2505ES | |
| London School of Hygiene and Tropical Medicine Research Ethics Committee | 27450 | |
| Uganda Virus Research Institute Research Ethics Committee (UVRI REC) | GC/127/19/07/708 | For PIP trial |
| London School of Hygiene and Tropical Medicine Research Ethics Committee | 14851 | For PIP trial |
| Uganda National Council for Science and Technology (UNCST) | HS 2650 | For PIP trial |
| Rhode Island Hospital Institutional Review Board | #401020 | For PIP trial |
| National Drug Authority of Uganda | CTC 0133/2020 | For PIP trial |
Schistosomiasis, Environmental Enteric Dysfunction, inflammation
English
SEEP Study whose dataset is referenced here used baseline data from the Praziquantel for children under age four years: A Phase II PK/PD driven dose finding trial (PIP trial) for schistosomiasis-infected group. The uninfected comparison group was purposely recruited for the SEEP Study.
| Project name | Funder/sponsor | Grant number |
| PIP Trial | US National Institutes of Health, National Institute of Child Health and Human Development | R01 HD095562 |
| Forename | Surname | Faculty / Dept | Institution | Role |
| Andrew | Edielu | Immunomodulation & Vaccines Theme | MRC/UVRI & LSHTM Uganda Research Unit | Data Creator, Contact person, Editor |
| Amaya L. | Bustinduy | Department of Clinical Research | London School of Hygiene & Tropical Medicine | Supervisor |
| Patrice A. | Mawa | Immunomodulation & Vaccines Theme | MRC/UVRI & LSHTM Uganda Research Unit | Supervisor |
| Martin J. | Holland | Department of Clinical Research | London School of Hygiene & Tropical Medicine | Supervisor |
| Racheal | Nakyesige | Immunomodulation & Vaccines Theme | MRC/UVRI & LSHTM Uganda Research Unit | Data Manager |
| Gloria Kakoba | Ayebazibwe | Immunomodulation & Vaccines Theme | MRC/UVRI & LSHTM Uganda Research Unit | Data collector |
| Hannah | Wei Wu | Center for International Health Research | Rhode Island Hospital | Data Collector |
| Filename | Description | Access status | Licence |
| Schistosomiasis_data | Dataset on schistosomiasis and inflammatory markers | Open to all | Creative Commons Attribution (CCBY) |
| Schistosomiasis_data_codebook | Code book for the schistosomiasis and inflammatory markers dataset | Open to all | Creative Commons Attribution (CCBY) |
| 5164_UserGuide | User guide for the schistosomiasis and inflammatory markers dataset | Open to all | Creative Commons Attribution (CCBY) |