Data on inflammatory markers in preschool age children from Albertine Region of Western Uganda – User Guide

Persistent identifier

10.17037/DATA.00005164

Alternative title

SEEP study data on inflammatory markers in schistosomiasis

Description

Anonymized dataset of 354 pre-school age children (PSAC) with Schistosoma mansoni infection and 61 schistosomiasis-negative PSAC from Albertine Region of Western Uganda. Participants were recruited between April 2021 and February 2023. Dataset includes demographic variables, schistosomiasis infection parameters, anthropometric data as well as intestinal and systemic inflammatory markers.

Data collection methods

Demographic data was obtained through completion of interview questionnaires. Anthropometric measurements (weight and height) yielded primary data that was used to calculate height-for-age z-scores, weight-for-age z-scores and weight-for-height z-scores. Intestinal and systemic markers were obtained from stool, urine and plasma samples through Enzyme-Linked Immunosorbent Assay (ELISA) and High-Pressure Liquid Chromatography (HPLC).

Data analysis and preparation

Data cleaning was done in REDCap database where the initial entry was made and exported to STATA 19 for analysis. Descriptive analysis was done followed by crude and adjusted regression models to assess association between schistosomiasis infection status and inflammatory markers.

Geographic regions

Hoima District and Buliisa District in Albertine Region of Uganda.

Key dates

Data was collected between April 2021 and February 2023. Laboratory assays were conducted between April 2021 and April 2024, followed by statistical analysis from May 2024 to July 2024.

Quality controls

Staff were trained in data management and data was entered into REDCap database with checks. During data collection, the Data Manager ran data quality checks and raised queries for the attention of the field data collectors, who verified any discrepancies and responded accordingly.

Population

Preschool age children aged 12-47 months. One group of 354 participants were infected with Schistosoma mansoni, and a comparison group of 61 participants were negative for Schistosoma mansoni. For infected participants, baseline samples from the Praziquantel for children under age four years: A Phase II PK/PD driven dose finding trial (PIP trial) for schistosomiasis-infected group. The uninfected comparison group was purposely recruited for the SEEP Study.

Privacy

Anonymized electronic data was entered in REDCap and each data collector used a password-protected account. Hard copies such as consent forms were kept in lockable cabinets with restricted access.

Ethics

Organisation Ethics ID Other information
Uganda Virus Research Institute Research Ethics Committee (UVRI REC) GC/127/914  
Uganda National Council for Science and Technology (UNCST) HS2505ES  
London School of Hygiene and Tropical Medicine Research Ethics Committee 27450  
Uganda Virus Research Institute Research Ethics Committee (UVRI REC) GC/127/19/07/708 For PIP trial
London School of Hygiene and Tropical Medicine Research Ethics Committee 14851 For PIP trial
Uganda National Council for Science and Technology (UNCST) HS 2650 For PIP trial
Rhode Island Hospital Institutional Review Board #401020 For PIP trial
National Drug Authority of Uganda CTC 0133/2020 For PIP trial

Keywords

Schistosomiasis, Environmental Enteric Dysfunction, inflammation

Language of written material

English

Project information

SEEP Study whose dataset is referenced here used baseline data from the Praziquantel for children under age four years: A Phase II PK/PD driven dose finding trial (PIP trial) for schistosomiasis-infected group. The uninfected comparison group was purposely recruited for the SEEP Study.

Project name Funder/sponsor Grant number
PIP Trial US National Institutes of Health, National Institute of Child Health and Human Development R01 HD095562

Creators

Forename Surname Faculty / Dept Institution Role
Andrew Edielu Immunomodulation & Vaccines Theme MRC/UVRI & LSHTM Uganda Research Unit Data Creator, Contact person, Editor
Amaya L. Bustinduy Department of Clinical Research London School of Hygiene & Tropical Medicine Supervisor
Patrice A. Mawa Immunomodulation & Vaccines Theme MRC/UVRI & LSHTM Uganda Research Unit Supervisor
Martin J. Holland Department of Clinical Research London School of Hygiene & Tropical Medicine Supervisor
Racheal Nakyesige Immunomodulation & Vaccines Theme MRC/UVRI & LSHTM Uganda Research Unit Data Manager
Gloria Kakoba Ayebazibwe Immunomodulation & Vaccines Theme MRC/UVRI & LSHTM Uganda Research Unit Data collector
Hannah Wei Wu Center for International Health Research Rhode Island Hospital Data Collector

File description

Filename Description Access status Licence
Schistosomiasis_data Dataset on schistosomiasis and inflammatory markers Open to all Creative Commons Attribution (CCBY)
Schistosomiasis_data_codebook Code book for the schistosomiasis and inflammatory markers dataset Open to all Creative Commons Attribution (CCBY)
5164_UserGuide User guide for the schistosomiasis and inflammatory markers dataset Open to all Creative Commons Attribution (CCBY)