Data supporting "Temporal trends of SARS-CoV-2 exposure in adolescents: a longitudinal pilot study nested in a Uganda birth cohort" – User Guide

Persistent identifier

10.17037/DATA.00004678

Description

This dataset comprises individual-level data of a subset of participants from a longitudinal study nested within the Entebbe Mother and Baby Study (EMaBS) birth cohort, based in Entebbe municipality, Uganda. Data were drawn from three studies that these participants took part in, where samples were collected: pre-pandemic samples (2014–2016) collected during a blood pressure study; pandemic-era samples collected during the POPVAC C trial (2020–2021) (ISRCTN32849447), which evaluated the impact of BCG revaccination on vaccine responses; and samples from the CoHost study (2021–2022), a 12-month longitudinal follow-up assessing SARS-CoV-2 infection and exposure from participants in the POPVAC B randomised controlled trial. The study aimed to analyse temporal trends in SARS-CoV-2 seropositivity in Ugandan adolescents using pre-pandemic (2014-2016) and pandemic-era samples (2020-2022). We utilised previously stored demographic and clinical data, along with bio-banked samples from these three studies.

Data collection methods

Previously stored demographic and clinical data, along with bio-banked samples, were used for this study. In the CoHost study, participants were administered a questionnaire capturing demographic information, medical history, SARS-CoV-2 exposure, and recent illness history, recorded using the research electronic data capture (REDCap) application.

Geographic regions

Entebbe municipality, Uganda.

Key dates

Population

A subset of participants from a longitudinal study nested within the Entebbe Mother and Baby Study (EMaBS) birth cohort, based in Entebbe municipality, Uganda.

Privacy

Direct identifiers have been removed from the data.

Ethics

Organisation Ethics ID Other information
Uganda Virus Research Institute EMaBS Approved 18 May 2022

Keywords

SARS-CoV-2, Adolescents, COVID-19, Uganda, Longitudinal

Language of written material

English

Project information

Project name Funder/sponsor Grant number Other information
CoHost Science for Africa Foundation GCA/SARSCov2-2-20-002 https://scienceforafrica.foundation/
VAnguard National Institute for Health Research (NIHR) NIHR134531  

Participating institution

Creators

Forename Surname Faculty / Dept Institution Role
Ludoviko Zirimenya Vaccines Research Theme MRC/UVRI & LSHTM Uganda Research Unit Data Creator
Agnes Natukunda Faculty of Epidemiology and Population Health / Dept of Infectious Disease Epidemiology and International Health London School of Hygiene & Tropical Medicine Data Creator
Jacent Nassuna   MRC/UVRI & LSHTM Uganda Research Unit Data Creator
Gyaviira Nkurunungi   MRC/UVRI & LSHTM Uganda Research Unit Data Creator
Alison M. Elliott Faculty of Infectious and Tropical Diseases / Dept of Clinical Research London School of Hygiene & Tropical Medicine Data Creator
Emily Webb Faculty of Epidemiology and Population Health / Dept of Infectious Disease Epidemiology and International Health London School of Hygiene & Tropical Medicine Data Creator

Associated roles

Forename Surname Faculty / Dept Institution Role
Christopher Zziwa   MRC/UVRI & LSHTM Uganda Research Unit Researcher
Caroline Ninsiima   MRC/UVRI & LSHTM Uganda Research Unit Researcher
Christine Kukundakwe   MRC/UVRI & LSHTM Uganda Research Unit Researcher
Milly Namutebi   MRC/UVRI & LSHTM Uganda Research Unit Researcher
Gloria Oduru   MRC/UVRI & LSHTM Uganda Research Unit Researcher
Denis Nsubuga   MRC/UVRI & LSHTM Uganda Research Unit Researcher
Josephine Tumusiime   MRC/UVRI & LSHTM Uganda Research Unit Researcher
Racheal Nakyesige   MRC/UVRI & LSHTM Uganda Research Unit Researcher
Simon Kimuda   MRC/UVRI & LSHTM Uganda Research Unit Researcher
Jennifer Serwanga   MRC/UVRI & LSHTM Uganda Research Unit Researcher
Katie J Doores   King’s College London Researcher
Anne Wajja   MRC/UVRI & LSHTM Uganda Research Unit Researcher

File description

Filename Description Access status Licence
CoHost_dataset Individual-level data collected from a subset of participants from a longitudinal study nested within the Entebbe Mother and Baby Study (EMaBS) birth cohort Controlled access Data sharing agreement
CoHost_dataset_codebook Codebook for CoHost dataset Open access Creative Commons Attribution (CCBY)
4679_UserGuide User guide for CoHost dataset (this document) Open access Creative Commons Attribution (CCBY)