Data for: Evaluation of a novel point-of-care lateral flow assay screening for Neisseria gonorrhoeae infection among pregnant women in Zimbabwe

Persistent identifier

10.17037/DATA.00004472

Description

The study evaluated the performance of a novel lateral flow assay for gonorrhoea among pregnant women attending routine antenatal care in Zimbabwe, against the Xpert CT/NG (reference test). This evaluation was embedded within the IPSAZ study (Investigating point-of-care diagnostics for sexually transmitted infections and antimicrobial resistance in primary care in Zimbabwe). This is a cross-sectional dataset, with one row per person, including demographic data, HIV symptom status, and STI results.

Data codebook

The following variables are contained within the dataset.

Variable name Variable label Answer label Answer code Variable type
rand_id Unlinked study ID Open ended   Numeric
id_site Clinic site     Numeric
    Site A 1  
    Site B 2  
age Age (years) Open ended   Integer
education_level Highest level of education     Numeric
    No formal education 1  
    Primary 2  
    Secondary 3  
    Vocational 4  
    Higher/University 5  
occupation_status Current employment status     Numeric
    Unemployed 1  
    Student 2  
    Self-employed/business owner 3  
    Salaried employment 4  
    Informal work 5  
    Retired/pensioned 6  
    Other 7  
father_relationship Relationship with father of child     Numeric
    Married 1  
    Not married, but living together 2  
    Not married or living together 3  
    No relationship 4  
pregnancy_number Number of previous pregnancies Open ended   Numeric
trimester Trimester     Numeric
    First 1  
    Second 2  
    Third 3  
anc_visit_type Antenatal care visit type     Numeric
    Booking 1  
    Follow-up 2  
antibiot Antibiotic use in past 2 weeks     Numeric
    No 0  
    Yes 1  
    Unknown 9  
antibiot_spc Specify antibiotic Open ended   String
curr_symp_vd Current symptom: vaginal discharge     Numeric
    No 0  
    Yes 1  
curr_symp_vulval Current symptom: vulval irritation or itching     Numeric
    No 0  
    Yes 1  
curr_symp_lap Current symptom: lower abdominal or pelvic pain   Numeric
    No 0  
    Yes 1  
curr_symp_dyspareunia Current symptom: dyspareunia     Numeric
    No 0  
    Yes 1  
curr_symp_sore Current symptom: genital ulcer, sore or swelling     Numeric
    No 0  
    Yes 1  
curr_symp_rect_pain Current symptom: rectal pain     Numeric
    No 0  
    Yes 1  
curr_symp_rash Current symptom: rash     Numeric
    No 0  
    Yes 1  
curr_symp_warts Current symptom: warts     Numeric
    No 0  
    Yes 1  
curr_symp_smell Current symptom: foul smell     Numeric
    No 0  
    Yes 1  
pre_test_hiv_status Pre-test HIV status     Numeric
    Negative 0  
    Positive 1  
    Don't know 9  
arv_status Antiretroviral therapy use     Numeric
    No 0  
    Yes 1  
hiv_status HIV status     Numeric
    Negative 0  
    Positive 1  
tv_result Trichomoniasis result     Numeric
    Negative 0  
    Positive 1  
ct_result Chlamydia result     Numeric
    Negative 0  
    Positive 1  
ng_result Gonorrhoea result (Xpert)     Numeric
    Negative 0  
    Positive 1  
ng_lfa_final Gonorrhoea result (LFA)     Numeric
    Negative 0  
    Positive 1  
Reader LFA reader     Numeric
    Reader 1 1  
    Reader 2 2  
    Reader 3 3  
    Reader 4 4  
TestSignal LFA test signal (fluorescence) Open ended   Numeric
NG2ct NG2 cycle threshold (Xpert) Open ended   Numeric
NG4ct NG4 cycle threshold (Xpert) Open ended   Numeric